Supported File Formats

ome-writers currently supports writing the following file formats:

• OME-TIFF - A widely used file format for storing multi-dimensional biological image data.
• OME-Zarr - A next-generation file format for bioimaging data based on the Zarr specification.
• Scratch Arrays - Lightweight in-memory (or disk-backed) array storage for testing, previewing, and real-time visualization.

Selecting and output formats is as simple as changing the target AcquisitionSettings.root_path to end in .tiff or .zarr. Or, explicitly select a Acquisitionsettings.format.

See the individual format pages linked above for more details on each format and their specific options.